Machine Learning Engineer / Machine Learning Engineeress

Precise Health SA - June 20, 2025

About Us

Precise Health SA is a Swiss biotech startup pioneering next-generation phage therapy through AI-driven bacterial diagnostics and digital therapeutics. We develop tools that enable predictive, regulatory-grade bacterial profiling and antimicrobial selection to combat multidrug-resistant infections. We are looking for a mission-driven Machine Learning Engineer with a strong foundation in DevOps and a solid grasp of microbiology to help scale our core platform and accelerate access to personalized antimicrobials.

Key Responsibilities

Model Development & Optimization

  • Design, train, and validate machine learning models for bacterial identification, host interaction prediction, and susceptibility classification.
  • Continuously improve explainability, robustness, and performance across key clinical indicators (e.g., NPV/PPV).

Infrastructure & Deployment

  • Build and maintain CI/CD pipelines for ML workflows in production.
  • Ensure scalable deployment of inference pipelines across secure cloud and on-premises environments.
  • Manage containerized services (Docker, Kubernetes) and version control of models (e.g., MLflow, DVC).

Data Engineering & Integration

  • Support ingestion, preprocessing, and integration of genomic, phenotypic, and clinical metadata from diverse sources.
  • Optimize data pipelines for large-scale sequencing and screening datasets.

Scientific Collaboration

  • Work closely with microbiologists and clinical teams to translate biological questions into ML/AI solutions.
  • Support in-silico validation and benchmarking of digital susceptibility tools for regulatory submissions (e.g., CE Mark).

Required Qualifications

  • MSc/PhD in Computer Science, Bioinformatics, Computational Biology, or a related field.
  • 3+ years of experience in applied machine learning, ideally in genomics, life sciences, or digital health.
  • Hands-on experience with:
    • Python, scikit-learn, XGBoost, and deep learning frameworks (e.g., PyTorch, TensorFlow).
    • DevOps tools: Docker, GitHub Actions, cloud environments (AWS, GCP, Azure).
    • ML lifecycle management tools (e.g., MLflow, Airflow, DVC).
  • Familiarity with bacterial genomics, resistome prediction, or host-pathogen interaction modeling.
  • Strong team player with excellent communication skills across technical and scientific domains.

Nice to Have

  • Experience in deploying AI/ML components as part of Software as a Medical Device (SaMD) platforms.
  • Knowledge of phage biology, microbiome research, or antimicrobial resistance.
  • Contributions to open-source bioinformatics or ML tooling.

Apply online using the form below. Please note that only applications matching the job profile will be considered.

Location : Sion
Country : Switzerland

Application Form

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