Machine Learning Engineer / Machine Learning Engineeress

Precise Health SA - June 6, 2025

About Us

Precise Health SA is a Swiss biotech startup pioneering next-generation phage therapy through AI-driven bacterial diagnostics and digital therapeutics. We develop tools that enable predictive, regulatory-grade bacterial profiling and antimicrobial selection to combat multidrug-resistant infections. We are seeking a mission-driven Machine Learning Engineer with a strong foundation in DevOps and a solid understanding of microbiology to help scale our core platform and accelerate access to personalized antimicrobials.

Key Responsibilities

  • Model Development & Optimization
    • Design, train, and validate machine learning models for bacterial identification, host interaction prediction, and susceptibility classification.
    • Continuously improve explainability, robustness, and performance across key clinical indicators (e.g., NPV/PPV).
  • Infrastructure & Deployment
    • Build and maintain CI/CD pipelines for ML workflows in production.
    • Ensure scalable deployment of inference pipelines across secure cloud and on-premises environments.
    • Manage containerized services (Docker, Kubernetes) and version control of models (e.g., MLflow, DVC).
  • Data Engineering & Integration
    • Support ingestion, preprocessing, and integration of genomic, phenotypic, and clinical metadata from diverse sources.
    • Optimize data pipelines for large-scale sequencing and screening datasets.
  • Scientific Collaboration
    • Work closely with microbiologists and clinical teams to translate biological questions into ML/AI solutions.
    • Support in-silico validation and benchmarking of digital susceptibility tools for regulatory submissions (e.g., CE Mark).

Required Qualifications

  • MSc/PhD in Computer Science, Bioinformatics, Computational Biology, or a related field.
  • 3+ years of experience in applied machine learning, ideally in genomics, life sciences, or digital health.
  • Hands-on experience with:
    • Python, scikit-learn, XGBoost, and deep learning frameworks (e.g., PyTorch, TensorFlow).
    • DevOps tools: Docker, GitHub Actions, cloud environments (AWS, GCP, Azure).
    • ML lifecycle management tools (e.g., MLflow, Airflow, DVC).
  • Familiarity with bacterial genomics, resistome prediction, or host-pathogen interaction modeling.
  • Strong team player with effective communication skills across technical and scientific domains.

Nice to Have

  • Experience in deploying AI/ML components as part of Software as a Medical Device (SaMD) platforms.
  • Knowledge of phage biology, microbiome research, or antimicrobial resistance.
  • Contributions to open-source bioinformatics or ML tooling.

Apply online using the form below. Only applications matching the job profile will be considered.

Location : Sion
Country : Switzerland

Application Form

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